CDS

Accession Number TCMCG047C16023
gbkey CDS
Protein Id GFP94588.1
Location join(671727..671824,672649..672679,673209..673272,673352..673482,674325..674510,674603..674668,674759..674926,674998..675345,675461..675514,675682..675710,675811..675879,676005..676089,676215..676301,676767..677692,677815..678859)
Organism Phtheirospermum japonicum
locus_tag PHJA_001603200

Protein

Length 1128aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJDB3858 BioSample:SAMD00029051
db_source BMAC01000357.1
Definition mediator of RNA polymerase ii transcription subunit 25 [Phtheirospermum japonicum]
Locus_tag PHJA_001603200

EGGNOG-MAPPER Annotation

COG_category S
Description mediator of RNA polymerase II transcription subunit
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
KEGG_ko ko:K15168        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000902        [VIEW IN EMBL-EBI]
GO:0000904        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003713        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007602        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009581        [VIEW IN EMBL-EBI]
GO:0009582        [VIEW IN EMBL-EBI]
GO:0009583        [VIEW IN EMBL-EBI]
GO:0009585        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009620        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009753        [VIEW IN EMBL-EBI]
GO:0009755        [VIEW IN EMBL-EBI]
GO:0009867        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009909        [VIEW IN EMBL-EBI]
GO:0009911        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010026        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010090        [VIEW IN EMBL-EBI]
GO:0010091        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010218        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010927        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016592        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030030        [VIEW IN EMBL-EBI]
GO:0030031        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031347        [VIEW IN EMBL-EBI]
GO:0031349        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032870        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045893        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048582        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048831        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050832        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051094        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051240        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051606        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071229        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071395        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071495        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090626        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1902680        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903508        [VIEW IN EMBL-EBI]
GO:1905499        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000241        [VIEW IN EMBL-EBI]
GO:2000243        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATACCGAAGCAGCTGATCGTGGCCGTTGAAGGCACGGCGGCGATTGGGACCTTGTGGCAAACAATCGTCTCCGATTACCTCGACAAGATCATTAGATGCTTTTGCGGAAATGAGTCAGTGGGTCAGAAGCTTTCAACATCCCAGGTTGAGCTCTCACTGATCATGTTTAGTGCTCATGATTCATACAGTGGTTGCCTTGTACAATGGAGTGGTTGGACCAAAGACATGGATATATTCTTTCAGTGGCTCTCAGCTATACCATTTGCAGTTGGTGGTTTCAATGATGCTGCGATTGCTGAAGGGCTTGCCAAAGCTTTGACGATGTTCTCTTTCCCTGATGGAAACCAGAATCAAAATGTGGATGGGCAAAAACACTGTGTTCTTGTAGCTGCAGGTTGCAATCCTTACCCACAACCACAGAATCTGGAGCAGAGCGAGAATATCATCGAAACACAACCAGATAATCGCCTATCTGATGCAGAGGCAGTAGCAAAGTCATTTGCACAGTGTGCTATTTCTCTGTCTATTATTTGTCCAAAGAAGCTTCCAAAACTTAGAGCAATCTATAACGCGGGAAAGCGCAATCCCCGAGCTCCAGATCCGCCTTTGGATAATGTTAAGAACCCTCATTTCCTTGTCCTCATCTCAGAGGGTTTTATGGAAGCCCGTGCTGCGTTAAGTAGGTCTGCAATGACGAATTTGCCTTTGTCAAATCAAAACCATGTCAAGATGGATGTGACTGAGCCCACCACATCTGCAACCGGCTCCGCATTTCCTCAAATGTGGTTTGTTCCTAGATCCACTTCTCAACCACCGATATCAACATCTCAGGAAATGATTCTGGATAATGAAAACGTCCAAGATATGAAATCTCTAGCACCCACCTTGCGTCCCATGAGGATTTTGAACGATGTGGCCCAAGCCCATCAAGCCCTAGCCGTAGGAAGTTCTATTGGGCTTCCGTCTATGGTTGGAATTGTATCGTCAGCGCCTCCAGCACAAGCTGTAATTTCTTCAGTTTCATCGTGCGTCACGGCTGGCCAGGTTGCTCAAAACTCGGCAAAATCAAAATACGCCAAAGTGTGGGAGGGAAGCTATTATGGACAGCGACGAGGCCAGCCTGTTTTCATTACCAGACTGGAGGGATACAGAAGTGTATCAGCTTCTGAGACGCTTGCTGCAAATTGGCCTCCAACGATGCAGATAGTACGCCTGATATCTCAGGACTATATGAATAACAAGCAATATGTTGGGAAGGCTGATTTTCTAGTTTTTCGTGCGATGGATAAGCATGGGTTTCTTGAGCAGCTGCAAGAAAAGAAGCTATGTGCGGTAGTACAGTTACCATCCCAGACATTGCTGCTTGGAGTTTCAGATAAAGTATACCGTTTGATTGGAAAATTGTTTCCCGGGAAACATTTTTATGAAAGAGTACCACCTATCATCGAGGAGTCATCATCGTCGGTCAATGCACCTTCAGTTGCTCAACAAGTATCATCTAATCAAGGCAAAATATTATCAAGCCAAGATGCTCTTGAGGTTGATTTGAAAAATCTTCCGAGTGATTCAGGTCTAAGACCCAACATAATAAGCTATCCACCTAACTTAATTGCACAGGTGCGTAGAGCTTACTTATTAAAAGGTCCATGTCAACCCCGTGAGCTTGATTTTCATCAAACGACGGATGGAAATCGAAAGCGTAAATTTAGAGGAAATGATGAACCAGATATCTCTTTTGAAGAAGTATCAAAATCGTCGAAAATTGATTGTCGTTGCAGATTAAATGCATCAATTGTTTGTTTGCGCTATCTAATTATGCAAGGATTACTTTTTCGAGGAAATGATGAATCGGAAGGATTTTTAAATCAAGGGATTCTCATTGAACTTCTGAAAGTTATTGCTTCTTATAATGAGGAAATCAATAAAGTTGTATTGAATAATGCGCCTGGAAATCTCAAACACATATCTTCTGATACTCAAAAGGATCTTATGAATGCATGTGCAGTTGAGACGACAAACGCTATCATAAAGGATCTTGGAGGTGATTTTTTCTCTATTTTAGTTGATGAGTGTCGGGATGTAGAGCAAATCGGGGTAGTTATACGTTATGTGAATAAGAGTGGATGTGTGATTGAGCGTTTTCTTGGTCTTGTGCATGTTAGTGGCATAACTGCAGCCTCGCTCGAGAAAGGCATTCTTTCTTTGTTCTTGACTCATGGCTTGAGCATTTCTAGTTTGAGAGGTCAAAGTTATGATGGAGCCAGCAATATGAGAGGCGAATTCAACGGATTAAAGAGTTTGATACGTAAGAAAAACCCTAATGCTCACTATGTCCATAGATATGCTTCGAGAAAAGCAAATAGAGAAGTCATGGAAGGAATTGTAAATGATGATGTCATGCGATCGGGATCCCATTACGGCACTCTCATTAACTTGGTGCATCTATTTGCTTCTGTTGTTGATGTTCTCGAGTATGTTGGGGAGAATGGTAATGATGATACACAGAGAGCAGAAGCCATTGATTTGCTAGAGATTGTGAATCGGTTTGAGTTTGTTTTCGTTTTACATCTCATGAGGAGACTTTTGGGAATCACGCGCGAATTGTCTCAAGTTCTGGAAAGAAAGGATCGAGATATTGTTAATGCAGTGAGTCTTGTTAAAGTATCAAAAATTCGTTTGCAAGCAATGAGAGAGAATGGTTGGGAGGATTTGTTGGCTGAGATTTCCAAGTTTTGCAACAAACACGAGATAATCGTGCTGAATATGGAAGATGCATACGCGAGGCGTAAAATTGAAAGGCTCACTACTACTAATCTTCATCATTACCGAGTCGAGCTATTTTGTTCTGTGATTGACTTGCAAGCTCGAGAGCTAAATCATCGTTTTGATGAAGTGAACACAGAATTGCTTTTATCTGTGGCATGCTTTGATCCGAGTGACTCATTTGCTGCATTTGACAAAGAGAAGCTAATTCGCCTTGCAAGATTTTATCCTGCTGAGTTTCCTGCCGTTGCTCTGTATGAACTCGAATTCCAACTCGAAAACTTTATTTTGGATGTTCGTTTAGACGAAGGCTTCTGTGAAATAGCGGGTATAGGAGGTCTCGCTCAGAAGATGGTTGCTACAAGAAAGCATATAGTTTTTCCATTGGTTTACTTGTTAGTTAAATTGTCGTTGATCTTACCGGTAGCAAGTGCCACGGTGGAAAGAGCTTTTTCGGGAATGAGAATCATCGAGAGCTCATTACGCGACCGAATGAGAGATGATAATGATGGGCTATTGAATGATTATTTGGTTACATACATTGATGAAAGAGACATATTTCAAAATATTAGCGATGAGGATATCATGCAACGATTTCAAAATATGAAGAATAGACGCTAA
Protein:  
MIPKQLIVAVEGTAAIGTLWQTIVSDYLDKIIRCFCGNESVGQKLSTSQVELSLIMFSAHDSYSGCLVQWSGWTKDMDIFFQWLSAIPFAVGGFNDAAIAEGLAKALTMFSFPDGNQNQNVDGQKHCVLVAAGCNPYPQPQNLEQSENIIETQPDNRLSDAEAVAKSFAQCAISLSIICPKKLPKLRAIYNAGKRNPRAPDPPLDNVKNPHFLVLISEGFMEARAALSRSAMTNLPLSNQNHVKMDVTEPTTSATGSAFPQMWFVPRSTSQPPISTSQEMILDNENVQDMKSLAPTLRPMRILNDVAQAHQALAVGSSIGLPSMVGIVSSAPPAQAVISSVSSCVTAGQVAQNSAKSKYAKVWEGSYYGQRRGQPVFITRLEGYRSVSASETLAANWPPTMQIVRLISQDYMNNKQYVGKADFLVFRAMDKHGFLEQLQEKKLCAVVQLPSQTLLLGVSDKVYRLIGKLFPGKHFYERVPPIIEESSSSVNAPSVAQQVSSNQGKILSSQDALEVDLKNLPSDSGLRPNIISYPPNLIAQVRRAYLLKGPCQPRELDFHQTTDGNRKRKFRGNDEPDISFEEVSKSSKIDCRCRLNASIVCLRYLIMQGLLFRGNDESEGFLNQGILIELLKVIASYNEEINKVVLNNAPGNLKHISSDTQKDLMNACAVETTNAIIKDLGGDFFSILVDECRDVEQIGVVIRYVNKSGCVIERFLGLVHVSGITAASLEKGILSLFLTHGLSISSLRGQSYDGASNMRGEFNGLKSLIRKKNPNAHYVHRYASRKANREVMEGIVNDDVMRSGSHYGTLINLVHLFASVVDVLEYVGENGNDDTQRAEAIDLLEIVNRFEFVFVLHLMRRLLGITRELSQVLERKDRDIVNAVSLVKVSKIRLQAMRENGWEDLLAEISKFCNKHEIIVLNMEDAYARRKIERLTTTNLHHYRVELFCSVIDLQARELNHRFDEVNTELLLSVACFDPSDSFAAFDKEKLIRLARFYPAEFPAVALYELEFQLENFILDVRLDEGFCEIAGIGGLAQKMVATRKHIVFPLVYLLVKLSLILPVASATVERAFSGMRIIESSLRDRMRDDNDGLLNDYLVTYIDERDIFQNISDEDIMQRFQNMKNRR